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  • Top cofit genes for GFF4802 from Sphingobium sp. HT1-2

    Type IV secretion system protein VirD4

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2326 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.83
    2 GFF3584 Phage lysozyme R (EC 3.2.1.17) no 0.83
    3 GFF668 Rrf2 family transcriptional regulator no 0.82
    4 GFF2577 UPF0337 protein Pfl_4351 no 0.82
    5 GFF4624 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.80
    6 GFF5267 Transposase no 0.80
    7 GFF944 Large protein containing transglutaminase-like domain no 0.79
    8 GFF3035 hypothetical protein no 0.79
    9 GFF2462 hypothetical protein no 0.78
    10 GFF3002 alpha-L-arabinofuranosidase II (EC 3.2.1.55) no 0.78
    11 GFF3744 Flagellar biosynthesis protein FliS no 0.77
    12 GFF4206 Outer membrane beta-barrel assembly protein BamE no 0.77
    13 GFF1445 hypothetical protein no 0.77
    14 GFF1537 Ferredoxin reductase no 0.77
    15 GFF5251 Death on curing protein, Doc toxin no 0.77
    16 GFF2241 Aldose 1-epimerase no 0.76
    17 GFF381 hypothetical protein no 0.76
    18 GFF4958 hypothetical protein no 0.76
    19 GFF5115 Mobile element protein no 0.76
    20 GFF4437 Chromosome (plasmid) partitioning protein ParB no 0.76

    Or look for negative cofitness