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  • Top cofit genes for GFF4800 from Variovorax sp. SCN45

    DNA mismatch repair protein MutL
    SEED: DNA mismatch repair protein MutL
    KEGG: DNA mismatch repair protein MutL

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4064 no description no 0.58
    2 GFF6807 BUG/TctC family periplasmic protein no 0.56
    3 GFF4908 NAD(P) transhydrogenase N-domain of subunit alpha (EC 1.6.1.2) 0.47 0.56
    4 GFF6523 hypothetical protein no 0.55
    5 GFF4637 CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase (EC 4.2.1.-) no 0.55
    6 GFF625 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.53
    7 GFF3781 Transcriptional regulator, AcrR family 0.58 0.53
    8 GFF2365 Altronate dehydratase (EC 4.2.1.7) no 0.53
    9 GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.53
    10 GFF4610 Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) no 0.52
    11 GFF4482 Transcriptional regulator MraZ 0.46 0.52
    12 GFF6951 Alcohol dehydrogenase (EC 1.1.1.1) no 0.52
    13 GFF378 RNA (nucleoside 2'-O)-methyltransferase no 0.52
    14 GFF7228 Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) no 0.52
    15 GFF4936 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) 0.51 0.52
    16 GFF1016 no description no 0.52
    17 GFF6623 Esterase/lipase no 0.52
    18 GFF450 Outer membrane vitamin B12 receptor BtuB 0.62 0.52
    19 GFF4227 Thiamine pyrophosphate-requiring enzymes no 0.51
    20 GFF7414 no description no 0.51

    Or look for negative cofitness