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  • Top cofit genes for GFF480 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Serine transporter
    SEED: Serine transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4864 COG2363 0.25 0.72
    2 GFF519 Di/tripeptide permease DtpB 0.43 0.67
    3 GFF718 putative inner membrane protein no 0.67
    4 GFF2813 YcgN (Fragment) no 0.66
    5 GFF3372 Phosphate:acyl-ACP acyltransferase PlsX no 0.65
    6 GFF875 Uncharacterized protein YtfN no 0.65
    7 GFF2608 Putative arylsulfatase regulatory protein no 0.63
    8 GFF2184 Predicted P-loop ATPase fused to an acetyltransferase COG1444 no 0.62
    9 GFF4741 Type III secretion transcriptional regulator HilD no 0.61
    10 GFF4338 Putative transport protein 0.30 0.61
    11 GFF2972 ATPase, AFG1 family no 0.61
    12 GFF3726 YheO-like PAS domain no 0.60
    13 GFF874 Uncharacterized protein YtfM precursor no 0.60
    14 GFF694 Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG no 0.60
    15 GFF317 FIG074102: hypothetical protein no 0.60
    16 GFF4433 Ureidoglycolate dehydrogenase (EC 1.1.1.154) 0.65 0.59
    17 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis no 0.59
    18 GFF635 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) no 0.59
    19 GFF569 Qercetin 2,3-dioxygenase no 0.59
    20 GFF3388 Lipoprotein YcfM, part of a salvage pathway of unknown substrate no 0.59

    Or look for negative cofitness