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  • Top cofit genes for GFF479 from Variovorax sp. SCN45

    Fumarate hydratase class II (EC 4.2.1.2)
    SEED: Fumarate hydratase class II (EC 4.2.1.2)
    KEGG: fumarate hydratase, class II

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5572 FIG00984604: hypothetical protein no 0.50
    2 GFF2204 no description no 0.49
    3 GFF1459 Glutathione S-transferase (EC 2.5.1.18) no 0.45
    4 GFF7389 Cyclohexanone monooxygenase (EC 1.14.13.22) no 0.44
    5 GFF3206 no description no 0.44
    6 GFF6583 Transcriptional regulator, LysR family no 0.43
    7 GFF4917 no description no 0.42
    8 GFF2152 twitching motility protein PilH 0.38 0.42
    9 GFF1945 FIG01003589: hypothetical protein no 0.42
    10 GFF1412 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) no 0.42
    11 GFF2488 Two-component transcriptional response regulator, LuxR family no 0.42
    12 GFF3081 no description no 0.42
    13 GFF771 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) no 0.42
    14 GFF456 Transcriptional regulator, AraC family no 0.41
    15 GFF5220 putative secreted oxidoreductase no 0.40
    16 GFF2997 FIG027190: Putative transmembrane protein 0.35 0.40
    17 GFF2954 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) no 0.40
    18 GFF2341 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.40
    19 GFF6802 Uncharacterized MFS-type transporter no 0.40
    20 GFF4929 Aminotransferase, class III no 0.40

    Or look for negative cofitness