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  • Top cofit genes for GFF4789 from Variovorax sp. SCN45

    FIG01126746: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.62
    2 GFF2161 Dihydroorotase (EC 3.5.2.3) no 0.60
    3 GFF4370 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.59
    4 GFF27 4-hydroxybenzoyl-CoA thioesterase family active site no 0.56
    5 GFF4363 Chromosome initiation inhibitor no 0.56
    6 GFF1055 Fumarylacetoacetate hydrolase family protein no 0.56
    7 GFF4494 hypothetical protein no 0.54
    8 GFF5353 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.54
    9 GFF6207 Allantoin racemase (EC 5.1.99.3) no 0.54
    10 GFF810 Glutathione S-transferase (EC 2.5.1.18) no 0.52
    11 GFF5238 General secretion pathway protein L no 0.50
    12 GFF4184 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.50
    13 GFF5573 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.50
    14 GFF4954 no description no 0.49
    15 GFF48 DNA double-strand break repair protein Mre11 no 0.49
    16 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO no 0.49
    17 GFF5785 FIG00931285: hypothetical protein no 0.49
    18 GFF2479 hypothetical protein no 0.48
    19 GFF2021 FIG00538369: hypothetical protein no 0.48
    20 GFF2178 Methyl-accepting chemotaxis sensor/transducer protein no 0.47

    Or look for negative cofitness