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  • Top cofit genes for GFF4785 from Variovorax sp. SCN45

    AttF component of AttEFGH ABC transport system / AttG component of AttEFGH ABC transport system
    SEED: AttF component of AttEFGH ABC transport system / AttG component of AttEFGH ABC transport system

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.51
    2 GFF3125 no description no 0.51
    3 GFF4096 no description no 0.51
    4 GFF6733 hypothetical protein no 0.50
    5 GFF4089 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) 0.56 0.48
    6 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) 0.26 0.47
    7 GFF3574 hypothetical protein no 0.47
    8 GFF4404 Mobile element protein no 0.47
    9 GFF2083 putative periplasmic membrane protein no 0.44
    10 GFF2399 TonB-dependent receptor no 0.44
    11 GFF1266 Cysteine desulfurase (EC 2.8.1.7) no 0.44
    12 GFF6867 no description no 0.44
    13 GFF4517 Uncharacterized MFS-type transporter YtbD no 0.44
    14 GFF3364 Rhodanese-related sulfurtransferase no 0.43
    15 GFF1186 Ferrichrome-iron receptor no 0.43
    16 GFF4261 RNA polymerase ECF-type sigma factor no 0.43
    17 GFF5832 MoaF protein precursor no 0.43
    18 GFF2157 UPF0301 protein YqgE no 0.43
    19 GFF3154 no description no 0.43
    20 GFF5609 Transcriptional regulator, LuxR family no 0.43

    Or look for negative cofitness