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  • Top cofit genes for GFF4782 from Variovorax sp. SCN45

    Pyridoxal-5'-phosphate-dependent enzyme beta superfamily (fold type II)
    SEED: Cysteine synthase B (EC 2.5.1.47)
    KEGG: cysteine synthase A

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7415 no description no 0.68
    2 GFF1793 hypothetical protein no 0.60
    3 GFF3788 putative secreted protein no 0.55
    4 GFF3762 hypothetical protein no 0.55
    5 GFF1641 Polyketide synthase modules and related proteins no 0.55
    6 GFF287 hypothetical protein no 0.54
    7 GFF1345 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.54
    8 GFF3199 Ser/Thr protein phosphatase family protein no 0.52
    9 GFF6341 no description no 0.52
    10 GFF6639 no description no 0.52
    11 GFF3707 ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) no 0.51
    12 GFF183 Virulence protein no 0.50
    13 GFF3945 Phosphate transport regulator (distant homolog of PhoU) no 0.50
    14 GFF2946 Regulator of competence-specific genes no 0.50
    15 GFF231 DNA ligase (ATP) (EC 6.5.1.1) no 0.50
    16 GFF5870 hypothetical protein no 0.49
    17 GFF1440 Multidomain signal transduction protein including CheB-like methylesterase, CheR-like methyltransferase and BaeS-like histidine kinase no 0.49
    18 GFF6822 Peptidase C14, caspase catalytic subunit p20 no 0.49
    19 GFF3799 Putative PROLIN-rich signal peptide protein no 0.48
    20 GFF1849 FIG00347667: hypothetical protein no 0.48

    Or look for negative cofitness