Top cofit genes for GFF4779 from Variovorax sp. SCN45

Broad-specificity amino acid ABC transporter, permease protein 2
SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF6388 Transcriptional regulator, AcrR family no 0.74
2 GFF2370 L-carnitine dehydratase/bile acid-inducible protein F no 0.74
3 GFF374 Transcription elongation factor GreA no 0.72
4 GFF4437 Low-complexity acidic protein, XCC2875 type no 0.70
5 GFF2825 Alkyl hydroperoxide reductase protein F 0.16 0.70
6 GFF2909 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) no 0.70
7 GFF6198 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) no 0.69
8 GFF7115 hypothetical protein no 0.69
9 GFF268 Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.69
10 GFF7293 Ribosome hibernation promoting factor Hpf no 0.69
11 GFF3867 Translation elongation factor LepA no 0.69
12 GFF6382 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) 0.25 0.69
13 GFF2818 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.57 0.69
14 GFF3067 Nitrogen regulation protein NtrB (EC 2.7.13.3) 0.25 0.68
15 GFF4449 TldD protein, part of TldE/TldD proteolytic complex 0.46 0.68
16 GFF569 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) no 0.68
17 GFF5157 Glucoamylase (EC 3.2.1.3) no 0.68
18 GFF5404 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) no 0.68
19 GFF561 Ribonucleotide reductase transcriptional regulator NrdR 0.34 0.67
20 GFF1187 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) no 0.67

Or look for negative cofitness