Top cofit genes for GFF4778 from Variovorax sp. SCN45

Broad-specificity amino acid ABC transporter, permease protein 1
SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF4632 Glycosyl transferase, family 2 no 0.63
2 GFF6298 Transcriptional regulator, LysR family no 0.59
3 GFF5255 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.58
4 GFF3184 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.58
5 GFF4606 3-ketoacyl-CoA thiolase [fadN-fadA-fadE operon] (EC 2.3.1.16) no 0.57
6 GFF5096 similar to protocatechuate 4,5-dioxygenase beta chain no 0.57
7 GFF4564 hypothetical protein no 0.57
8 GFF1332 no description no 0.56
9 GFF1356 Putative manganese efflux pump MntP no 0.56
10 GFF2635 hypothetical protein no 0.54
11 GFF6259 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI (EC 2.7.8.37) no 0.54
12 GFF1051 no description no 0.54
13 GFF6567 hypothetical protein no 0.53
14 GFF5782 BUG/TctC family periplasmic protein no 0.53
15 GFF1053 no description no 0.53
16 GFF3609 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.53
17 GFF6353 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain no 0.53
18 GFF4183 hypothetical protein no 0.53
19 GFF6682 Efflux ABC transporter, permease protein no 0.52
20 GFF6887 Transporter, LysE family no 0.52

Or look for negative cofitness