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  • Top cofit genes for PS417_24440 from Pseudomonas simiae WCS417

    TetR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_09540 penicillin-binding protein 2 no 0.31
    2 PS417_25750 polyamine ABC transporter substrate-binding protein no 0.30
    3 PS417_08345 chemotaxis protein 0.45 0.29
    4 PS417_07710 membrane protein 0.41 0.29
    5 PS417_11850 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) (from data) no 0.28
    6 PS417_11885 Inositol transport system sugar-binding protein (from data) no 0.28
    7 PS417_11855 Myo-inosose-2 dehydratase (EC 4.2.1.44) (from data) no 0.27
    8 PS417_10920 LysR family transcriptional regulator no 0.27
    9 PS417_22125 porin no 0.27
    10 PS417_10925 malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) no 0.27
    11 PS417_11895 Inositol transport system permease protein (from data) no 0.26
    12 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.56 0.26
    13 PS417_04380 ABC transporter permease 0.46 0.26
    14 PS417_13825 glycosyltransferase no 0.26
    15 PS417_11890 Inositol transport system ATP-binding protein (from data) no 0.25
    16 PS417_06770 multidrug transporter 0.35 0.25
    17 PS417_26250 peptidase M19 no 0.25
    18 PS417_27255 glycine cleavage system protein T 0.69 0.24
    19 PS417_12895 pyruvate dehydrogenase no 0.24
    20 PS417_27070 alpha/beta hydrolase no 0.24

    Or look for negative cofitness