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Cofit
Protein
Homologs
Top cofit genes for PS417_24440 from
Pseudomonas simiae WCS417
TetR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_09540
penicillin-binding protein 2
no
0.31
2
PS417
_25750
polyamine ABC transporter substrate-binding protein
no
0.30
3
PS417
_08345
chemotaxis protein
0.45
0.29
4
PS417
_07710
membrane protein
0.41
0.29
5
PS417
_11850
5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29)
(from data)
no
0.28
6
PS417
_11885
Inositol transport system sugar-binding protein
(from data)
no
0.28
7
PS417
_11855
Myo-inosose-2 dehydratase (EC 4.2.1.44)
(from data)
no
0.27
8
PS417
_10920
LysR family transcriptional regulator
no
0.27
9
PS417
_22125
porin
no
0.27
10
PS417
_10925
malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18)
(from data)
no
0.27
11
PS417
_11895
Inositol transport system permease protein
(from data)
no
0.26
12
PS417
_23910
3-methyl-2-oxobutanoate hydroxymethyltransferase
0.56
0.26
13
PS417
_04380
ABC transporter permease
0.46
0.26
14
PS417
_13825
glycosyltransferase
no
0.26
15
PS417
_11890
Inositol transport system ATP-binding protein
(from data)
no
0.25
16
PS417
_06770
multidrug transporter
0.35
0.25
17
PS417
_26250
peptidase M19
no
0.25
18
PS417
_27255
glycine cleavage system protein T
0.69
0.24
19
PS417
_12895
pyruvate dehydrogenase
no
0.24
20
PS417
_27070
alpha/beta hydrolase
no
0.24
Or look for
negative cofitness