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  • Top cofit genes for PS417_24435 from Pseudomonas simiae WCS417

    shikimate dehydrogenase
    SEED: Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25)
    KEGG: shikimate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03190 antibiotic biosynthesis monooxygenase 0.31 0.22
    2 PS417_24500 DEAD/DEAH box helicase no 0.20
    3 PS417_22565 formyltetrahydrofolate deformylase no 0.19
    4 PS417_27235 ribonucleotide reductase 0.21 0.19
    5 PS417_16765 transporter no 0.18
    6 PS417_01040 RND transporter no 0.18
    7 PS417_05360 hypothetical protein no 0.18
    8 PS417_04695 acriflavine resistance protein B no 0.18
    9 PS417_20960 Nitrate-binding regulatory protein (nasS) (from data) 0.39 0.18
    10 PS417_01745 histidine ammonia-lyase no 0.17
    11 PS417_09185 acyl-CoA dehydrogenase 0.62 0.17
    12 PS417_19215 polyphosphate kinase no 0.17
    13 PS417_04500 hypothetical protein no 0.16
    14 PS417_08830 membrane protein 0.23 0.16
    15 PS417_07140 peptidase M48 0.49 0.16
    16 PS417_02030 3-oxoacyl-ACP synthase no 0.16
    17 PS417_08265 hypothetical protein no 0.16
    18 PS417_10465 tRNA 2-selenouridine synthase no 0.15
    19 PS417_13925 hypothetical protein no 0.15
    20 PS417_14445 aldo/keto reductase 0.21 0.15

    Or look for negative cofitness