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  • Top cofit genes for GFF4763 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE)
    KEGG: type III secretion protein SctW

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2913 Argininosuccinate synthase (EC 6.3.4.5) no 0.60
    2 GFF316 Putative DNA-binding protein in cluster with Type I restriction-modification system no 0.58
    3 GFF1781 Putative binding-protein-dependent transport system no 0.58
    4 GFF4337 FIG001943: hypothetical protein YajQ 0.38 0.58
    5 GFF2838 Cold shock protein CspC no 0.58
    6 GFF1259 Error-prone repair protein UmuD no 0.55
    7 GFF1965 Phosphoglycerate transporter protein PgtP no 0.54
    8 GFF2268 L-rhamnose-proton symporter no 0.54
    9 GFF1923 FIG074102: hypothetical protein no 0.53
    10 GFF255 hypothetical protein no 0.51
    11 GFF691 ABC transport system, permease component YbhR no 0.50
    12 GFF1622 Putative amidohydrolase no 0.50
    13 GFF1962 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) no 0.50
    14 GFF1336 FIG01047778: hypothetical protein no 0.49
    15 GFF271 Possible transferase no 0.49
    16 GFF2229 FIG074102: hypothetical protein no 0.49
    17 GFF4091 FIG034929: Fimbriae usher protein SafC no 0.49
    18 GFF1375 hypothetical protein no 0.48
    19 GFF4883 Mobile element protein no 0.48
    20 GFF2262 Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22) no 0.48

    Or look for negative cofitness