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  • Top cofit genes for GFF4760 from Sphingobium sp. HT1-2

    tRNA-modifying protein YgfZ
    SEED: Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF981 hypothetical protein no 0.83
    2 GFF2595 hypothetical protein no 0.81
    3 GFF2792 hypothetical protein no 0.81
    4 GFF1149 Nitrogen regulation protein NtrB (EC 2.7.13.3) no 0.80
    5 GFF2791 Two-component system sensor histidine kinase no 0.78
    6 GFF2900 HflK protein no 0.78
    7 GFF2594 Efflux ABC transporter, permease/ATP-binding protein no 0.78
    8 GFF2286 ATP-dependent Clp protease ATP-binding subunit ClpA no 0.78
    9 GFF2599 Quinohemoprotein amine dehydrogenase alpha subunit (EC 1.4.99.-) no 0.77
    10 GFF785 Ammonium transporter no 0.76
    11 GFF2007 Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated no 0.76
    12 GFF1148 Nitrogen regulation protein NR(I), GlnG (=NtrC) no 0.76
    13 GFF2832 Maltodextrin glucosidase (EC 3.2.1.20) no 0.76
    14 GFF2596 hypothetical protein no 0.75
    15 GFF3480 ATP-dependent RNA helicase Atu1833 no 0.75
    16 GFF3818 Phosphocarrier protein, nitrogen regulation associated no 0.75
    17 GFF3483 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.75
    18 GFF3352 TonB-dependent receptor no 0.74
    19 GFF2782 Two-component transcriptional response regulator, LuxR family no 0.74
    20 GFF776 RNA polymerase sigma-54 factor RpoN no 0.74

    Or look for negative cofitness