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  • Top cofit genes for PS417_24335 from Pseudomonas simiae WCS417

    50S rRNA methyltransferase
    SEED: 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-)
    KEGG: ribosomal RNA small subunit methyltransferase C

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24500 DEAD/DEAH box helicase 0.29 0.49
    2 PS417_26370 RNA helicase 0.55 0.44
    3 PS417_04290 hypothetical protein no 0.40
    4 PS417_20930 50S rRNA methyltransferase 0.55 0.39
    5 PS417_01340 agmatine deiminase 0.19 0.38
    6 PS417_24230 ATP-dependent protease 0.26 0.38
    7 PS417_06135 glycerol-3-phosphate acyltransferase no 0.37
    8 PS417_08530 spermidine synthase no 0.36
    9 PS417_19955 hypothetical protein 0.31 0.35
    10 PS417_03005 arginine decarboxylase 0.21 0.35
    11 PS417_17125 transcriptional regulator no 0.34
    12 PS417_21630 magnesium transporter no 0.34
    13 PS417_04295 peptidase PmbA no 0.33
    14 PS417_14835 amidase 0.51 0.33
    15 PS417_05880 ribosomal protein S12 methylthiotransferase no 0.32
    16 PS417_02560 23S rRNA methyltransferase 0.42 0.31
    17 PS417_02775 heat-shock protein 0.36 0.31
    18 PS417_07635 transcription-repair coupling factor no 0.31
    19 PS417_04010 glycine/betaine ABC transporter ATP-binding protein no 0.30
    20 PS417_25650 anhydro-N-acetylmuramic acid kinase no 0.30

    Or look for negative cofitness