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  • Top cofit genes for GFF4752 from Sphingobium sp. HT1-2

    Transcriptional regulator, MerR family
    SEED: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2766 Cytochrome c precursor no 0.74
    2 GFF2248 Inner membrane component of TAM transport system no 0.73
    3 GFF626 Efflux ABC transporter, permease/ATP-binding protein no 0.71
    4 GFF1145 RNA-binding protein Hfq / RNA-binding protein Hfq no 0.71
    5 GFF147 ATP-dependent hsl protease ATP-binding subunit HslU no 0.71
    6 GFF2558 Peptidase, M23/M37 family no 0.71
    7 GFF4096 Lipopolysaccharide biosynthesis protein no 0.70
    8 GFF2594 Efflux ABC transporter, permease/ATP-binding protein no 0.70
    9 GFF2595 hypothetical protein no 0.70
    10 GFF1434 Formyltetrahydrofolate deformylase (EC 3.5.1.10) no 0.70
    11 GFF785 Ammonium transporter no 0.69
    12 GFF2007 Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated no 0.69
    13 GFF3352 TonB-dependent receptor no 0.69
    14 GFF3569 hypothetical protein no 0.69
    15 GFF1149 Nitrogen regulation protein NtrB (EC 2.7.13.3) no 0.69
    16 GFF2701 Cobalt/zinc/cadmium resistance protein CzcD no 0.68
    17 GFF3227 hypothetical protein no 0.68
    18 GFF4047 RNA polymerase ECF-type sigma factor no 0.68
    19 GFF4353 Nitrite-sensitive transcriptional repressor NsrR no 0.68
    20 GFF1148 Nitrogen regulation protein NR(I), GlnG (=NtrC) no 0.68

    Or look for negative cofitness