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  • Top cofit genes for GFF4733 from Variovorax sp. SCN45

    Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family)
    SEED: Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF211 protein of unknown function UPF0125 no 0.64
    2 GFF5662 no description no 0.63
    3 GFF3789 hypothetical protein no 0.62
    4 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.60
    5 GFF6107 Zinc transporter, ZIP family no 0.59
    6 GFF2859 Excinuclease ABC subunit C no 0.59
    7 GFF6471 Transcriptional regulator, AraC family no 0.59
    8 GFF5137 no description no 0.57
    9 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD no 0.57
    10 GFF769 Conserved TM helix no 0.56
    11 GFF253 Transcriptional regulator, LysR family no 0.56
    12 GFF4961 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.55
    13 GFF2220 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.55
    14 GFF5463 RidA/YER057c/UK114 superfamily protein no 0.55
    15 GFF4553 RNA chaperone ProQ no 0.55
    16 GFF2968 MaoC-like dehydratase no 0.55
    17 GFF4847 Conjugative transfer protein TrbD no 0.55
    18 GFF2631 Transcriptional regulator, ArsR family no 0.54
    19 GFF2718 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.54
    20 GFF3470 Permease of the drug/metabolite transporter (DMT) superfamily no 0.54

    Or look for negative cofitness