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  • Top cofit genes for GFF473 from Variovorax sp. SCN45

    Cytochrome c551/c552
    SEED: Cytochrome c551/c552

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1594 Antitoxin DinJ (binds YafQ toxin) no 0.61
    2 GFF169 Protein-glutamate methylesterase (EC 3.1.1.61) no 0.60
    3 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) no 0.59
    4 GFF3723 Cytochrome c5 no 0.59
    5 GFF2304 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion 0.42 0.59
    6 GFF2298 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 0.52 0.59
    7 GFF4977 Transcriptional regulator for ferulate or vanillate catabolism no 0.58
    8 GFF4070 no description no 0.58
    9 GFF1155 Putative transmembrane protein no 0.57
    10 GFF7179 Xaa-Pro aminopeptidase (EC 3.4.11.9) no 0.57
    11 GFF168 MCP methyltransferase, CheR-type no 0.56
    12 GFF2300 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 0.48 0.56
    13 GFF6087 Transcriptional regulator, AcrR family no 0.56
    14 GFF3813 no description no 0.56
    15 GFF3264 Methionine biosynthesis protein MetW no 0.55
    16 GFF6695 Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) no 0.55
    17 GFF229 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.54
    18 GFF2297 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) 0.36 0.54
    19 GFF5919 KEGG: type VI secretion system secreted protein Hcp no 0.54
    20 GFF342 ATP-dependent Clp protease adaptor protein ClpS no 0.54

    Or look for negative cofitness