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  • Top cofit genes for GFF4721 from Variovorax sp. SCN45

    ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron)
    SEED: ABC transporter permease protein
    KEGG: putative spermidine/putrescine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2082 transcriptional regulator, Crp/Fnr family no 0.57
    2 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO no 0.51
    3 GFF556 no description no 0.50
    4 GFF6724 hypothetical protein no 0.49
    5 GFF6666 Transcriptional regulator protein no 0.49
    6 GFF4971 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.48
    7 GFF763 Transporter, LysE family 0.32 0.48
    8 GFF1995 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) no 0.48
    9 GFF5078 Uncharacterized protein CbuG_0353 no 0.48
    10 GFF2612 no description no 0.48
    11 GFF6858 no description no 0.47
    12 GFF3705 Amidases related to nicotinamidase no 0.47
    13 GFF4360 no description no 0.47
    14 GFF1171 Transcriptional regulator, AraC family no 0.47
    15 GFF6485 hypothetical protein no 0.46
    16 GFF1267 Probable lipoprotein signal peptide no 0.46
    17 GFF3505 hypothetical protein no 0.46
    18 GFF2011 hypothetical protein no 0.46
    19 GFF5912 Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain no 0.46
    20 GFF3722 FIG00931152: hypothetical protein no 0.45

    Or look for negative cofitness