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  • Top cofit genes for GFF4716 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
    SEED: ABC transporter substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) no 0.60
    2 GFF4804 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE no 0.59
    3 GFF5996 BUG/TctC family periplasmic protein no 0.58
    4 GFF6335 no description no 0.56
    5 GFF1026 Probable chromate transporter protein no 0.56
    6 GFF4058 Copper/silver efflux RND transporter, outer membrane protein CusC no 0.55
    7 GFF3516 Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) 0.34 0.54
    8 GFF1592 Response regulator/GGDEF/EAL domain protein no 0.52
    9 GFF6083 hypothetical protein PA3071 no 0.52
    10 GFF6133 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.51
    11 GFF900 hypothetical protein no 0.51
    12 GFF3553 FOG: TPR repeat no 0.50
    13 GFF1909 FIG00537389: hypothetical protein no 0.50
    14 GFF3782 hypothetical protein no 0.50
    15 GFF4162 Aldehyde dehydrogenase B (EC 1.2.1.22) no 0.49
    16 GFF4882 putative plasmid stabilization protein no 0.49
    17 GFF5047 hypothetical protein no 0.48
    18 GFF3300 hypothetical protein no 0.48
    19 GFF1691 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake no 0.48
    20 GFF3778 Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase no 0.48

    Or look for negative cofitness