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    • Top cofit genes for GFF4711 from Variovorax sp. SCN45

    Transamidase GatB domain protein
    SEED: Transamidase GatB domain protein
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4018 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family no 0.65
    2 GFF286 Transcriptional regulator, LysR family no 0.61
    3 GFF7189 dioxygenase, TauD/TfdA family no 0.54
    4 GFF555 Putative inner membrane protein no 0.54
    5 GFF7266 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) no 0.52
    6 GFF6203 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.50
    7 GFF7139 MATE efflux family protein no 0.50
    8 GFF1120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.49
    9 GFF1332 no description no 0.48
    10 GFF6778 possible endonuclease/exonuclease/phosphatase family protein no 0.48
    11 GFF4843 Conjugative transfer protein TrbF no 0.48
    12 GFF1629 Ferric reductase (1.6.99.14) no 0.48
    13 GFF1714 no description no 0.48
    14 GFF6838 BUG/TctC family periplasmic protein no 0.47
    15 GFF5399 Altronate dehydratase (EC 4.2.1.7) no 0.47
    16 GFF4085 Transcriptional regulator, LysR family no 0.47
    17 GFF6415 ATP-dependent DNA helicase RecQ 0.28 0.47
    18 GFF5085 hypothetical protein no 0.46
    19 GFF4460 Phosphatidate cytidylyltransferase (EC 2.7.7.41) no 0.46
    20 GFF3145 Two-component system response regulator QseB no 0.46

    Or look for negative cofitness