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  • Top cofit genes for GFF4708 from Variovorax sp. SCN45

    Transcriptional regulator RSp1267, LysR family
    SEED: Hydrogen peroxide-inducible genes activator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2924 BUG/TctC family periplasmic protein no 0.63
    2 GFF5191 Galactose-binding protein regulator no 0.50
    3 GFF4109 Aspartate aminotransferase (EC 2.6.1.1) no 0.48
    4 GFF1115 Putative transmembrane protein no 0.48
    5 GFF2385 no description no 0.48
    6 GFF4403 Mobile element protein 0.24 0.48
    7 GFF4541 Uncharacterized protein conserved in bacteria no 0.47
    8 GFF1171 Transcriptional regulator, AraC family no 0.47
    9 GFF2684 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.47
    10 GFF6298 Transcriptional regulator, LysR family no 0.47
    11 GFF2222 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.46
    12 GFF1219 SAM-dependent methyltransferase no 0.46
    13 GFF4018 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family 0.20 0.46
    14 GFF6137 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6 no 0.46
    15 GFF6487 Gfa-like protein no 0.45
    16 GFF5532 Putative oxidoreductase no 0.44
    17 GFF6485 hypothetical protein no 0.44
    18 GFF73 Probable haloacid dehalogenase no 0.43
    19 GFF7088 Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10) no 0.43
    20 GFF6385 Mll4878 protein no 0.43

    Or look for negative cofitness