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  • Top cofit genes for PS417_24070 from Pseudomonas simiae WCS417

    recombination and repair protein
    SEED: DNA repair protein RecN
    KEGG: DNA repair protein RecN (Recombination protein N)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25395 excinuclease ABC subunit A 0.92 0.66
    2 PS417_18685 excinuclease ABC subunit B 0.88 0.62
    3 PS417_24305 DNA repair protein RadA 0.93 0.54
    4 PS417_15120 chromosome segregation protein SMC 0.59 0.53
    5 PS417_15115 exonuclease SbcD 0.46 0.53
    6 PS417_13500 ATP-dependent DNA helicase 0.56 0.47
    7 PS417_00015 recombinase RecF 0.77 0.45
    8 PS417_20800 recombination protein RecR 0.91 0.44
    9 PS417_10725 excinuclease ABC subunit C 0.86 0.43
    10 PS417_05815 recombinase RecA 0.87 0.42
    11 PS417_06510 ATP-dependent DNA helicase DinG 0.84 0.39
    12 PS417_00405 DNA polymerase I 0.76 0.39
    13 PS417_05695 transcriptional regulator 0.64 0.34
    14 PS417_22895 tyrosine recombinase XerD 0.82 0.34
    15 PS417_07635 transcription-repair coupling factor 0.89 0.31
    16 PS417_23825 penicillin-binding protein 0.57 0.31
    17 PS417_05820 recombinase RecX 0.76 0.31
    18 PS417_27870 ATP-dependent DNA helicase RecG 0.85 0.27
    19 PS417_20850 hypothetical protein no 0.26
    20 PS417_02395 DNA topoisomerase IV subunit B no 0.26

    Or look for negative cofitness