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  • Top cofit genes for GFF4703 from Variovorax sp. SCN45

    Xylitol dehydrogenase (EC 1.1.1.9)
    SEED: Xylitol dehydrogenase (EC 1.1.1.9)
    KEGG: D-xylulose reductase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5281 Xylulose kinase (EC 2.7.1.17) 0.85 0.62
    2 GFF7186 NAD-dependent protein deacetylase of SIR2 family no 0.60
    3 GFF894 FIG024006: iron uptake protein no 0.59
    4 GFF6462 Integral membrane protein no 0.57
    5 GFF1880 Previously called glutamate synthase [NADPH] small chain no 0.56
    6 GFF5472 SEED: DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.55
    7 GFF7046 FIG00854755: hypothetical protein no 0.55
    8 GFF184 Adenylate cyclase (EC 4.6.1.1) no 0.54
    9 GFF681 Hypothetical protein in cluster with At3g50560-like gene family no 0.54
    10 GFF4647 no description no 0.53
    11 GFF467 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.53
    12 GFF7193 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.52
    13 GFF4503 RNA polymerase sigma factor no 0.52
    14 GFF1842 Transcriptional regulator, LysR family no 0.51
    15 GFF2050 hypothetical protein no 0.50
    16 GFF525 Tripartite tricarboxylate transporter TctC family no 0.50
    17 GFF6652 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.50
    18 GFF6434 Inner membrane protein YqiK no 0.50
    19 GFF1811 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.49
    20 GFF6677 regulatory protein no 0.49

    Or look for negative cofitness