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  • Top cofit genes for GFF470 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4111 ABC-type amino acid transport/signal transduction system, periplasmic component/domain no 0.55
    2 GFF1964 Histone acetyltransferase HPA2 and related acetyltransferases no 0.55
    3 GFF5602 FIG00348944: hypothetical protein no 0.53
    4 GFF1974 hypothetical protein no 0.52
    5 GFF5292 no description no 0.52
    6 GFF6831 hypothetical protein no 0.51
    7 GFF7262 no description no 0.49
    8 GFF6114 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.49
    9 GFF3703 LemA family protein no 0.49
    10 GFF6996 Flagellar hook-basal body complex protein FliE no 0.48
    11 GFF3274 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases no 0.48
    12 GFF4541 Uncharacterized protein conserved in bacteria 0.70 0.47
    13 GFF1013 hypothetical protein no 0.47
    14 GFF1775 no description no 0.47
    15 GFF512 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    16 GFF2492 BUG/TctC family periplasmic protein no 0.47
    17 GFF315 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase no 0.46
    18 GFF6782 TRAP transporter solute receptor, TAXI family precursor no 0.46
    19 GFF7083 Mobile element protein no 0.45
    20 GFF790 hypothetical protein no 0.45

    Or look for negative cofitness