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  • Top cofit genes for GFF4698 from Variovorax sp. SCN45

    Transcriptional regulator of various polyols utilization, AraC family
    SEED: Transcriptional regulator of various polyols utilization, AraC family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5582 BUG/TctC family periplasmic protein no 0.62
    2 GFF4059 hypothetical protein no 0.59
    3 GFF809 Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.58
    4 GFF7299 MotA/TolQ/ExbB proton channel family protein no 0.57
    5 GFF3368 Pyrimidine permease no 0.56
    6 GFF4154 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.55
    7 GFF3606 Similarities with probable transcriptional regulator LumQ no 0.54
    8 GFF336 no description no 0.54
    9 GFF6156 Aerobic carbon monoxide dehydrogenase (quinone), medium chain (EC 1.2.5.3) no 0.54
    10 GFF2388 hypothetical protein no 0.53
    11 GFF3828 hypothetical protein no 0.53
    12 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.53
    13 GFF436 LrgA-associated membrane protein LrgB no 0.52
    14 GFF1384 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) no 0.52
    15 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.51
    16 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.51
    17 GFF2682 Protein containing domains DUF403 no 0.51
    18 GFF1351 Acyl-CoA dehydrogenase no 0.51
    19 GFF6720 no description no 0.50
    20 GFF2313 Two-component system sensor histidine kinase no 0.50

    Or look for negative cofitness