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  • Top cofit genes for GFF4690 from Variovorax sp. SCN45

    Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA
    SEED: Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA
    KEGG: heavy-metal exporter, HME family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2738 hypothetical protein no 0.60
    2 GFF5496 BUG/TctC family periplasmic protein no 0.58
    3 GFF803 MutT/Nudix family protein no 0.58
    4 GFF5455 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) no 0.57
    5 GFF2649 putative autotransporter protein no 0.56
    6 GFF5586 Acetoin dehydrogenase E1 component beta-subunit (EC 2.3.1.190) no 0.54
    7 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.53
    8 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.52
    9 GFF1963 Transcriptional regulator, AsnC family no 0.52
    10 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.52
    11 GFF4159 no description no 0.51
    12 GFF6417 BUG/TctC family periplasmic protein no 0.51
    13 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) no 0.51
    14 GFF5661 hypothetical protein no 0.51
    15 GFF7373 CaiB/BaiF family protein no 0.51
    16 GFF5038 Tetracycline resistance, MFS efflux pump => Tet(C) no 0.51
    17 GFF7375 Arginine:pyruvate transaminase no 0.51
    18 GFF4979 no description no 0.50
    19 GFF462 BUG/TctC family periplasmic protein no 0.50
    20 GFF4252 hypothetical protein no 0.50

    Or look for negative cofitness