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  • Top cofit genes for GFF4686 from Variovorax sp. SCN45

    Copper-sensing two-component system response regulator CusR
    SEED: DNA-binding heavy metal response regulator
    KEGG: two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF348 Superoxide dismutase [Fe] (EC 1.15.1.1) no 0.56
    2 GFF1711 DUF3701 domain / Site-specific tyrosine recombinase no 0.56
    3 GFF6379 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.53
    4 GFF5100 putative membrane protein no 0.50
    5 GFF2218 FIG00455441: hypothetical protein no 0.49
    6 GFF2101 no description no 0.49
    7 GFF5422 putative membrane protein no 0.48
    8 GFF5289 hypothetical protein no 0.48
    9 GFF4328 hypothetical protein no 0.48
    10 GFF4724 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) no 0.47
    11 GFF4991 Polyhydroxyalkanoate granule-associated protein PhaF no 0.47
    12 GFF2328 no description no 0.46
    13 GFF1959 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.46
    14 GFF2205 hypothetical protein no 0.46
    15 GFF1018 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) no 0.46
    16 GFF2122 Type IV pilus biogenesis protein PilE no 0.45
    17 GFF6302 Transcriptional regulator, IclR family no 0.45
    18 GFF3738 Uncharacterized protein YraP no 0.45
    19 GFF2184 VWA containing CoxE family protein no 0.45
    20 GFF7012 Taurine ABC transporter, ATP-binding protein TauB no 0.45

    Or look for negative cofitness