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  • Top cofit genes for GFF4680 from Variovorax sp. SCN45

    tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200)
    SEED: tRNA:Cm32/Um32 methyltransferase
    KEGG: tRNA/rRNA methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4112 Rhodanese-related sulfurtransferase, 4 domains no 0.64
    2 GFF4337 Electron transfer flavoprotein, alpha subunit 0.27 0.64
    3 GFF3409 Probable lipoprotein signal peptide no 0.59
    4 GFF3243 Flavin containing amine oxidoreductase no 0.58
    5 GFF4329 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.58
    6 GFF3034 no description no 0.56
    7 GFF1553 no description no 0.56
    8 GFF42 hypothetical protein no 0.55
    9 GFF4700 Various polyols ABC transporter, permease protein 1 no 0.55
    10 GFF6010 MmgE/PrpD family protein no 0.54
    11 GFF6563 no description no 0.54
    12 GFF7102 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) 0.32 0.54
    13 GFF5708 Pyridoxal phosphate-dependent aminotransferase no 0.53
    14 GFF7279 no description no 0.53
    15 GFF3085 no description no 0.52
    16 GFF3203 no description no 0.51
    17 GFF4974 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.51
    18 GFF5239 hypothetical protein no 0.51
    19 GFF4138 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.51
    20 GFF1590 FIG057251: Fe-S oxidoreductase no 0.51

    Or look for negative cofitness