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  • Top cofit genes for GFF4672 from Variovorax sp. SCN45

    Exoenzymes regulatory protein AepA precursor
    SEED: Exoenzymes regulatory protein AepA precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7266 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) no 0.70
    2 GFF1603 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.69
    3 GFF3145 Two-component system response regulator QseB no 0.67
    4 GFF4843 Conjugative transfer protein TrbF no 0.67
    5 GFF4828 no description no 0.65
    6 GFF1714 no description no 0.62
    7 GFF1598 no description no 0.58
    8 GFF5968 no description no 0.58
    9 GFF4605 FIG00537210: hypothetical protein no 0.57
    10 GFF653 no description no 0.57
    11 GFF4072 hypothetical protein no 0.56
    12 GFF6837 BUG/TctC family periplasmic protein no 0.56
    13 GFF6138 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 no 0.56
    14 GFF1543 Putative SigmaB asociated two-component system sensor protein no 0.56
    15 GFF6221 T6SS associated component TagF (ImpM) no 0.55
    16 GFF2082 transcriptional regulator, Crp/Fnr family no 0.55
    17 GFF1629 Ferric reductase (1.6.99.14) no 0.55
    18 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) no 0.55
    19 GFF6932 no description no 0.55
    20 GFF515 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.54

    Or look for negative cofitness