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  • Top cofit genes for GFF4671 from Variovorax sp. SCN45

    putative membrane protein
    SEED: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
    KEGG: uncharacterized protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6939 ABC-type antimicrobial peptide transport system, permease component no 0.63
    2 GFF5107 Transcriptional regulator, LysR family no 0.59
    3 GFF2098 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.55
    4 GFF2212 KEGG: prepilin peptidase CpaA no 0.55
    5 GFF1178 hypothetical protein no 0.54
    6 GFF5858 heme uptake regulator no 0.54
    7 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.52
    8 GFF2645 Acyl dehydratase no 0.51
    9 GFF842 hypothetical protein no 0.50
    10 GFF925 hypothetical protein no 0.50
    11 GFF2406 DipZ protein no 0.49
    12 GFF2003 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.48
    13 GFF5043 ABC transporter, permease protein (cluster 9, phospholipid) 0.34 0.48
    14 GFF6350 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA no 0.48
    15 GFF6112 Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1) no 0.48
    16 GFF4020 Arsenic resistance protein ArsH no 0.48
    17 GFF5927 3-oxoacyl-[ACP] synthase no 0.47
    18 GFF1651 Transcriptional regulator, AcrR family no 0.47
    19 GFF5637 Molybdenum ABC transporter ATP-binding protein ModC no 0.46
    20 GFF6963 Cytochrome c oxidase (cbb3-type) subunit CcoO (EC 1.9.3.1) 0.15 0.46

    Or look for negative cofitness