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  • Top cofit genes for GFF4670 from Variovorax sp. SCN45

    Transcriptional regulator, AcrR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) no 0.61
    2 GFF5475 Uncharacterized MFS-type transporter no 0.60
    3 GFF7246 HtrA protease/chaperone protein no 0.60
    4 GFF3427 FIG01006093: hypothetical protein no 0.60
    5 GFF6131 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.59
    6 GFF204 hypothetical protein no 0.59
    7 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA no 0.57
    8 GFF4585 hypothetical protein no 0.57
    9 GFF4944 Excinuclease ABC subunit A no 0.57
    10 GFF1155 Putative transmembrane protein no 0.55
    11 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) no 0.55
    12 GFF168 MCP methyltransferase, CheR-type no 0.55
    13 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) no 0.55
    14 GFF2359 Heat-inducible transcription repressor HrcA no 0.54
    15 GFF4667 hypothetical protein no 0.54
    16 GFF2304 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion no 0.54
    17 GFF4593 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.54
    18 GFF7087 oxidoreductase FAD/NAD(P)-binding domain protein no 0.54
    19 GFF3710 Lactoylglutathione lyase and related lyases no 0.54
    20 GFF2847 histone-like nucleoid-structuring protein H-NS no 0.53

    Or look for negative cofitness