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  • Top cofit genes for GFF467 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: Short-chain dehydrogenase/reductase SDR

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.35 0.66
    2 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) no 0.58
    3 GFF6355 T6SS secretion lipoprotein TssJ (VasD) no 0.57
    4 GFF2663 FIG022979: MoxR-like ATPases no 0.57
    5 GFF6704 no description no 0.57
    6 GFF3128 T6SS PAAR-repeat protein / RhaS protein no 0.55
    7 GFF2912 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.55
    8 GFF443 Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family no 0.54
    9 GFF1441 putative membrane protein no 0.53
    10 GFF4703 Xylitol dehydrogenase (EC 1.1.1.9) no 0.53
    11 GFF6309 Secreted and surface protein containing fasciclin-like repeats no 0.53
    12 GFF845 dTDP-glucose 4,6-dehydratase no 0.53
    13 GFF6928 Putative transmembrane protein no 0.52
    14 GFF886 Protein of unknown function DUF1446 no 0.52
    15 GFF4362 BUG/TctC family periplasmic protein no 0.52
    16 GFF738 T6SS PAAR-repeat protein no 0.52
    17 GFF2120 Type IV fimbrial biogenesis protein PilX no 0.52
    18 GFF2172 Permease of the drug/metabolite transporter (DMT) superfamily no 0.52
    19 GFF3494 hypothetical protein no 0.51
    20 GFF5281 Xylulose kinase (EC 2.7.1.17) no 0.51

    Or look for negative cofitness