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  • Top cofit genes for GFF467 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    type 1 fimbriae anchoring protein FimD
    SEED: type 1 fimbriae anchoring protein FimD
    KEGG: outer membrane usher protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF468 Putative fimbrial protein no 0.62
    2 GFF4428 Allantoinase (EC 3.5.2.5) no 0.61
    3 GFF1209 putative outer membrane protein no 0.58
    4 GFF412 Peptide transport system permease protein sapB (TC 3.A.1.5.5) no 0.58
    5 GFF340 autotransporter no 0.57
    6 GFF4091 FIG034929: Fimbriae usher protein SafC no 0.57
    7 GFF1338 Putative outer membrane protein no 0.57
    8 GFF957 Alcohol dehydrogenase (EC 1.1.1.1) no 0.56
    9 GFF161 Acetolactate synthase large subunit (EC 2.2.1.6) no 0.53
    10 GFF206 L-carnitine/gamma-butyrobetaine antiporter no 0.53
    11 GFF469 putative fimbrial protein precursor no 0.52
    12 GFF3919 secreted effector protein no 0.52
    13 GFF2913 Argininosuccinate synthase (EC 6.3.4.5) no 0.51
    14 GFF3928 Propionate kinase, propanediol utilization (EC 2.7.2.1) no 0.50
    15 GFF4573 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) no 0.49
    16 GFF2394 Protein of unknown function Smg no 0.49
    17 GFF2038 LysR family transcriptional regulator YfeR no 0.49
    18 GFF3696 Integrase no 0.48
    19 GFF1336 FIG01047778: hypothetical protein no 0.48
    20 GFF3923 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.48

    Or look for negative cofitness