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Cofit
Protein
Homologs
Top cofit genes for GFF4666 from
Variovorax sp. SCN45
Arylsulfatase (EC 3.1.6.1)
SEED: Choline-sulfatase (EC 3.1.6.6)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5596
Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1)
no
0.51
2
GFF766
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
no
0.46
3
GFF3691
ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose)
0.43
0.44
4
GFF6163
hypothetical protein
no
0.44
5
GFF4668
hypothetical protein
no
0.44
6
GFF5981
COGs COG3558
no
0.43
7
GFF671
hypothetical protein
no
0.43
8
GFF5229
Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3)
no
0.42
9
GFF4868
Type IV secretory pathway, VirD2 components (relaxase)
no
0.42
10
GFF776
Putative large exoprotein involved in heme utilization or adhesion of ShlA/HecA/FhaA family
no
0.42
11
GFF4971
ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.41
12
GFF3353
Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1)
no
0.40
13
GFF1758
KEGG: carboxymethylenebutenolidase
no
0.40
14
GFF4014
Transcriptional regulator, ArsR family
no
0.39
15
GFF4941
Gfa-like protein
no
0.39
16
GFF3182
Cyclopropane-fatty-acyl-phospholipid synthase-like protein, clusters with FIG005069
no
0.38
17
GFF2235
hypothetical protein
no
0.38
18
GFF6244
Predicted deacylase
no
0.38
19
GFF1631
L-lysine 6-monooxygenase (Lysine N(6)-hydroxylase) protein
0.22
0.38
20
GFF4717
ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
no
0.38
Or look for
negative cofitness