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  • Top cofit genes for PS417_23845 from Pseudomonas simiae WCS417

    hemin ABC transporter ATP-binding protein
    SEED: ABC-type hemin transport system, ATPase component
    KEGG: iron complex transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27945 type VI secretion protein ImpA no 0.20
    2 PS417_14975 tRNA hydroxylase no 0.20
    3 PS417_18835 peptide transporter no 0.17
    4 PS417_16100 antibiotic biosynthesis monooxygenase no 0.17
    5 PS417_04565 cell envelope biogenesis protein OmpA no 0.16
    6 PS417_08535 enoyl-CoA hydratase no 0.16
    7 PS417_17515 GfdT protein no 0.16
    8 PS417_17510 histidine kinase no 0.16
    9 PS417_17015 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.66 0.15
    10 PS417_20480 hypothetical protein no 0.15
    11 PS417_26005 biotin synthase no 0.15
    12 PS417_13350 phytanoyl-CoA dioxygenase 0.48 0.15
    13 PS417_04905 amino acid ABC transporter permease 0.31 0.15
    14 PS417_10690 acyl-CoA synthetase no 0.14
    15 PS417_09775 DeoR faimly transcriptional regulator no 0.14
    16 PS417_00620 GntR family transcriptional regulator 0.31 0.14
    17 PS417_15910 lysine transporter LysE no 0.14
    18 PS417_13945 GNAT family acetyltransferase 0.39 0.14
    19 PS417_23415 AraC family transcriptional regulator 0.22 0.14
    20 PS417_13055 aminotransferase no 0.14

    Or look for negative cofitness