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  • Top cofit genes for GFF4659 from Hydrogenophaga sp. GW460-11-11-14-LB1

    COG3332
    SEED: COG3332

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF488 RND multidrug efflux transporter; Acriflavin resistance protein no 0.30
    2 GFF2327 TRAP transporter solute receptor, unknown substrate 3 no 0.30
    3 GFF4873 Protein phosphatase 2C-like 0.52 0.29
    4 GFF3666 Response regulator NasT no 0.29
    5 GFF3386 BatA (Bacteroides aerotolerance operon) no 0.28
    6 GFF1279 Type IV fimbrial assembly, ATPase PilB no 0.28
    7 GFF2570 Thymidine phosphorylase (EC 2.4.2.4) no 0.27
    8 GFF1281 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.30 0.27
    9 GFF5766 PMID: 11481431 no 0.27
    10 GFF2123 Translation initiation factor 1 no 0.27
    11 GFF3704 Transglutaminase-like no 0.27
    12 GFF2718 21 kDa hemolysin precursor no 0.27
    13 GFF4834 Chromate transport protein ChrA no 0.27
    14 GFF344 Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3) 0.19 0.27
    15 GFF5566 FIG002207: Probable transmembrane protein no 0.27
    16 GFF825 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.26 0.27
    17 GFF2978 D-2-hydroxyglutarate dehydrogenase no 0.26
    18 GFF5613 Hydrogen peroxide-inducible genes activator no 0.26
    19 GFF4422 Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26) no 0.26
    20 GFF4581 hypothetical protein no 0.26

    Or look for negative cofitness