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Cofit
Protein
Homologs
Top cofit genes for GFF4659 from
Hydrogenophaga sp. GW460-11-11-14-LB1
COG3332
SEED: COG3332
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF488
RND multidrug efflux transporter; Acriflavin resistance protein
no
0.30
2
GFF2327
TRAP transporter solute receptor, unknown substrate 3
no
0.30
3
GFF4873
Protein phosphatase 2C-like
0.52
0.29
4
GFF3666
Response regulator NasT
no
0.29
5
GFF3386
BatA (Bacteroides aerotolerance operon)
no
0.28
6
GFF1279
Type IV fimbrial assembly, ATPase PilB
no
0.28
7
GFF2570
Thymidine phosphorylase (EC 2.4.2.4)
no
0.27
8
GFF1281
Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)
0.30
0.27
9
GFF5766
PMID: 11481431
no
0.27
10
GFF2123
Translation initiation factor 1
no
0.27
11
GFF3704
Transglutaminase-like
no
0.27
12
GFF2718
21 kDa hemolysin precursor
no
0.27
13
GFF4834
Chromate transport protein ChrA
no
0.27
14
GFF344
Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3)
0.19
0.27
15
GFF5566
FIG002207: Probable transmembrane protein
no
0.27
16
GFF825
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
0.26
0.27
17
GFF2978
D-2-hydroxyglutarate dehydrogenase
no
0.26
18
GFF5613
Hydrogen peroxide-inducible genes activator
no
0.26
19
GFF4422
Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26)
no
0.26
20
GFF4581
hypothetical protein
no
0.26
Or look for
negative cofitness