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  • Top cofit genes for GFF4655 from Variovorax sp. SCN45

    SAM-dependent methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7323 Transcriptional response regulatory protein GlrR no 0.62
    2 GFF6052 HNH endonuclease family protein no 0.60
    3 GFF6243 Ku domain protein no 0.59
    4 GFF3673 no description no 0.58
    5 GFF3748 KEGG: dihydrodipicolinate synthase no 0.58
    6 GFF494 RND efflux system, membrane fusion protein 0.44 0.58
    7 GFF3351 FIG00458971: hypothetical protein no 0.58
    8 GFF402 hypothetical protein no 0.58
    9 GFF2787 Transcriptional regulator PA1859, LysR family no 0.57
    10 GFF1119 Ribonuclease HI (EC 3.1.26.4) no 0.57
    11 GFF312 FIG021862: membrane protein, exporter no 0.56
    12 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) no 0.55
    13 GFF5580 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) no 0.55
    14 GFF2836 MotA/TolQ/ExbB proton channel family protein no 0.55
    15 GFF6067 Permease of the drug/metabolite transporter (DMT) superfamily 0.30 0.55
    16 GFF2835 putative TonB-dependent receptor no 0.54
    17 GFF5161 Glutathione S-transferase (EC 2.5.1.18) no 0.54
    18 GFF5268 protein of unknown function DUF805 no 0.54
    19 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.54
    20 GFF5308 Epoxide hydrolase (EC 3.3.2.9) no 0.54

    Or look for negative cofitness