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  • Top cofit genes for GFF4653 from Variovorax sp. SCN45

    Cytochrome c peroxidase (EC 1.11.1.5)
    SEED: Cytochrome c peroxidase
    KEGG: cytochrome c peroxidase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2285 Transcriptional regulator, RpiR family no 0.72
    2 GFF3388 Transcriptional regulator, AcrR family no 0.72
    3 GFF6731 Nucleoside ABC transporter, permease protein 1 no 0.64
    4 GFF730 Class A beta-lactamase (EC 3.5.2.6) no 0.63
    5 GFF211 protein of unknown function UPF0125 no 0.57
    6 GFF7179 Xaa-Pro aminopeptidase (EC 3.4.11.9) no 0.57
    7 GFF3050 Lactam utilization protein LamB no 0.56
    8 GFF2602 no description no 0.55
    9 GFF4561 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27) no 0.55
    10 GFF3181 FIG005069: Hypothetical protein no 0.54
    11 GFF2006 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) 0.33 0.53
    12 GFF634 Urea ABC transporter, permease protein UrtC no 0.53
    13 GFF966 Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) no 0.53
    14 GFF3886 Putative transmembrane protein no 0.52
    15 GFF5662 no description no 0.52
    16 GFF4679 Inositol-1-monophosphatase (EC 3.1.3.25) no 0.52
    17 GFF4077 hypothetical protein no 0.52
    18 GFF3199 Ser/Thr protein phosphatase family protein no 0.51
    19 GFF6215 no description no 0.51
    20 GFF4274 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.51

    Or look for negative cofitness