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  • Top cofit genes for GFF4650 from Variovorax sp. SCN45

    Transcriptional regulator, PadR family
    SEED: Transcriptional regulator, PadR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF797 no description no 0.68
    2 GFF3404 Benzoyl-CoA-dihydrodiol lyase (EC 4.1.2.44) no 0.64
    3 GFF2650 hypothetical protein no 0.63
    4 GFF3147 hypothetical protein no 0.63
    5 GFF1155 Putative transmembrane protein no 0.62
    6 GFF683 Transcriptional regulator, LysR family no 0.62
    7 GFF1612 no description no 0.60
    8 GFF2283 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.59
    9 GFF731 Transcriptional regulator, ArsR family no 0.59
    10 GFF712 ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.58
    11 GFF4292 no description no 0.58
    12 GFF7016 FAD-dependent oxidoreductase no 0.57
    13 GFF6992 Flagellum-specific ATP synthase FliI no 0.56
    14 GFF1191 Predicted hydroxymethylpyrimidine transporter CytX no 0.56
    15 GFF1891 Transcriptional regulator, GntR family no 0.55
    16 GFF1594 Antitoxin DinJ (binds YafQ toxin) no 0.55
    17 GFF5390 RecA protein no 0.55
    18 GFF3520 Osmosensitive K+ channel histidine kinase KdpD no 0.54
    19 GFF3813 no description no 0.54
    20 GFF5727 Methyl-accepting chemotaxis sensor/transducer protein no 0.54

    Or look for negative cofitness