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Cofit
Protein
Homologs
Top cofit genes for GFF4645 from
Variovorax sp. SCN45
GGDEF domain protein
SEED: GGDEF domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6347
AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination
no
0.57
2
GFF803
MutT/Nudix family protein
no
0.56
3
GFF1243
transglutaminase, N-terminal domain protein
no
0.54
4
GFF918
Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
no
0.52
5
GFF6139
Serine/threonine kinase
no
0.52
6
GFF379
Ribonuclease HII (EC 3.1.26.4)
0.34
0.51
7
GFF6230
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
no
0.51
8
GFF5616
hypothetical protein
no
0.51
9
GFF3730
Integral membrane protein
no
0.51
10
GFF5844
Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A
no
0.51
11
GFF2157
UPF0301 protein YqgE
no
0.51
12
GFF3830
Uncharacterized MFS-type transporter
no
0.50
13
GFF4994
Acyl-CoA-binding protein
no
0.50
14
GFF4896
Integrase
no
0.50
15
GFF592
Glutamyl-Q tRNA(Asp) synthetase
no
0.49
16
GFF5995
LysR family transcriptional regulator STM3121
no
0.48
17
GFF7340
ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.48
18
GFF2738
hypothetical protein
no
0.47
19
GFF1024
Aldo/keto reductase, SCO4109 family
no
0.47
20
GFF6613
no description
no
0.47
Or look for
negative cofitness