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  • Top cofit genes for GFF4645 from Variovorax sp. SCN45

    GGDEF domain protein
    SEED: GGDEF domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.57
    2 GFF803 MutT/Nudix family protein no 0.56
    3 GFF1243 transglutaminase, N-terminal domain protein no 0.54
    4 GFF918 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) no 0.52
    5 GFF6139 Serine/threonine kinase no 0.52
    6 GFF379 Ribonuclease HII (EC 3.1.26.4) 0.34 0.51
    7 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.51
    8 GFF5616 hypothetical protein no 0.51
    9 GFF3730 Integral membrane protein no 0.51
    10 GFF5844 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A no 0.51
    11 GFF2157 UPF0301 protein YqgE no 0.51
    12 GFF3830 Uncharacterized MFS-type transporter no 0.50
    13 GFF4994 Acyl-CoA-binding protein no 0.50
    14 GFF4896 Integrase no 0.50
    15 GFF592 Glutamyl-Q tRNA(Asp) synthetase no 0.49
    16 GFF5995 LysR family transcriptional regulator STM3121 no 0.48
    17 GFF7340 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.48
    18 GFF2738 hypothetical protein no 0.47
    19 GFF1024 Aldo/keto reductase, SCO4109 family no 0.47
    20 GFF6613 no description no 0.47

    Or look for negative cofitness