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  • Top cofit genes for PS417_23740 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: FIG000557: hypothetical protein co-occurring with RecR

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13425 cupin no 0.49
    2 PS417_06365 RNA polymerase sigma factor 0.11 0.45
    3 PS417_23950 polynucleotide phosphorylase/polyadenylase 0.42 0.42
    4 PS417_21045 cysteine synthase no 0.41
    5 PS417_19145 membrane protein no 0.41
    6 PS417_12610 RNA polymerase sigma factor no 0.41
    7 PS417_05975 chemotaxis protein CheW no 0.40
    8 PS417_21040 sulfurylase no 0.40
    9 PS417_21050 serine acetyltransferase no 0.40
    10 PS417_10720 chemotaxis protein CheY no 0.39
    11 PS417_12825 MFS transporter no 0.38
    12 PS417_16370 chemotaxis protein CheY no 0.38
    13 PS417_09900 hypothetical protein no 0.37
    14 PS417_16070 TonB-dependent receptor no 0.37
    15 PS417_13940 racemase no 0.36
    16 PS417_16160 ABC transporter substrate-binding protein no 0.36
    17 PS417_20955 secretion protein no 0.36
    18 PS417_28265 pyridoxamine kinase no 0.36
    19 PS417_02210 diguanylate cyclase no 0.35
    20 PS417_12920 endoribonuclease no 0.35

    Or look for negative cofitness