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  • Top cofit genes for PS417_23730 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) 0.95 0.65
    2 PS417_25705 lipoate--protein ligase 0.68 0.62
    3 PS417_12665 hypothetical protein 0.63 0.61
    4 PS417_20580 isocitrate dehydrogenase 0.89 0.59
    5 PS417_13840 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.89 0.58
    6 PS417_21275 GntR family transcriptional regulator 0.58 0.54
    7 PS417_17560 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) 0.73 0.54
    8 PS417_01180 ribosomal protein S6 modification protein 0.09 0.49
    9 PS417_21065 3-methylitaconate isomerase 0.80 0.46
    10 PS417_27210 AsnC family transcriptional regulator 0.78 0.45
    11 PS417_23690 Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) (from data) 0.18 0.41
    12 PS417_15935 Rrf2 family transcriptional regulator no 0.40
    13 PS417_10535 hypothetical protein no 0.38
    14 PS417_17545 2-oxoisovalerate dehydrogenase 0.85 0.36
    15 PS417_23725 methylmalonate-semialdehyde dehydrogenase 0.95 0.35
    16 PS417_01185 ribosomal protein S6 modification protein 0.22 0.35
    17 PS417_17565 branched-chain amino acid aminotransferase 0.60 0.33
    18 PS417_00900 4-aminobutyrate aminotransferase no 0.31
    19 PS417_00560 NAD synthetase 0.37 0.31
    20 PS417_27690 XRE family transcriptional regulator 0.21 0.29

    Or look for negative cofitness