• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_23725 from Pseudomonas simiae WCS417

    methylmalonate-semialdehyde dehydrogenase
    SEED: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
    KEGG: methylmalonate-semialdehyde dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_20580 isocitrate dehydrogenase 0.90 0.44
    2 PS417_10535 hypothetical protein no 0.38
    3 PS417_23730 LysR family transcriptional regulator 0.95 0.35
    4 PS417_17545 2-oxoisovalerate dehydrogenase 0.79 0.35
    5 PS417_21065 3-methylitaconate isomerase 0.91 0.31
    6 PS417_19335 isochorismatase 0.43 0.31
    7 PS417_17560 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) 0.66 0.30
    8 PS417_17565 branched-chain amino acid aminotransferase 0.56 0.30
    9 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.80 0.29
    10 PS417_21750 acetyl-CoA synthetase 0.31 0.29
    11 PS417_25705 lipoate--protein ligase 0.74 0.28
    12 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) 0.94 0.28
    13 PS417_19965 histidine kinase 0.44 0.27
    14 PS417_01180 ribosomal protein S6 modification protein 0.30 0.27
    15 PS417_12665 hypothetical protein 0.54 0.26
    16 PS417_16570 isocitrate lyase 0.87 0.26
    17 PS417_13840 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.86 0.24
    18 PS417_24765 membrane protein 0.17 0.24
    19 PS417_24100 transcriptional regulator PdhR 0.38 0.23
    20 PS417_04075 peptide ABC transporter substrate-binding protein no 0.21

    Or look for negative cofitness