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  • Top cofit genes for GFF4634 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Citrate synthase (si) (EC 2.3.3.1)
    SEED: Citrate synthase (si) (EC 2.3.3.1)
    KEGG: citrate synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2061 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup no 0.75
    2 GFF2216 DNA polymerase I (EC 2.7.7.7) no 0.73
    3 GFF1081 UPF0246 protein YaaA no 0.72
    4 GFF4162 DNA repair protein RecN no 0.68
    5 GFF3490 Exodeoxyribonuclease III (EC 3.1.11.2) no 0.67
    6 GFF1032 DNA polymerase III psi subunit (EC 2.7.7.7) no 0.65
    7 GFF1429 Excinuclease ABC subunit A no 0.65
    8 GFF2149 Malate dehydrogenase (EC 1.1.1.37) 0.99 0.63
    9 GFF3862 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) no 0.62
    10 GFF241 ATP-dependent DNA helicase UvrD/PcrA 0.47 0.61
    11 GFF2342 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.96 0.60
    12 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.57 0.59
    13 GFF3471 Putative two-component response regulator and GGDEF family protein YeaJ 0.39 0.59
    14 GFF4409 YbbM seven transmembrane helix protein no 0.58
    15 GFF2792 Hydrogenase maturation factor HoxQ no 0.58
    16 GFF4390 Recombination protein RecR 0.49 0.57
    17 GFF4408 YbbL ABC transporter ATP-binding protein no 0.57
    18 GFF684 Putative membrane protein no 0.56
    19 GFF4276 D-alanine--D-alanine ligase A (EC 6.3.2.4) no 0.55
    20 GFF296 Multidrug resistance protein D 0.36 0.55

    Or look for negative cofitness