Top cofit genes for GFF4623 from Variovorax sp. SCN45

Transcriptional regulator, AcrR family
SEED: Transcriptional regulator SlmA, TetR family
KEGG: TetR/AcrR family transcriptional regulator

Rank Hit Name Description Conserved? Cofitness  
1 GFF943 Intracellular PHB depolymerase no 0.70
2 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) no 0.67
3 GFF966 Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) no 0.63
4 GFF796 Transcriptional activator MetR no 0.62
5 GFF2846 Putative Zn-dependent oxidoreductase PA5234 no 0.61
6 GFF3265 Homoserine O-acetyltransferase (EC 2.3.1.31) 0.44 0.61
7 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.47 0.61
8 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) no 0.60
9 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA no 0.60
10 GFF5896 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.48 0.58
11 GFF4977 Transcriptional regulator for ferulate or vanillate catabolism no 0.57
12 GFF5096 similar to protocatechuate 4,5-dioxygenase beta chain no 0.57
13 GFF5267 Glucose-6-phosphate isomerase (EC 5.3.1.9) no 0.56
14 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.63 0.56
15 GFF6410 Histidine utilization repressor no 0.56
16 GFF6087 Transcriptional regulator, AcrR family no 0.55
17 GFF244 Cys regulon transcriptional activator CysB 0.48 0.55
18 GFF2218 FIG00455441: hypothetical protein no 0.55
19 GFF3723 Cytochrome c5 no 0.55
20 GFF168 MCP methyltransferase, CheR-type no 0.55

Or look for negative cofitness