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  • Top cofit genes for PS417_23640 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Hydrogen peroxide-inducible genes activator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00130 SulP family inorganic anion transporter no 0.24
    2 PS417_18090 iron ABC transporter no 0.20
    3 PS417_11660 acylamide amidohydrolase no 0.19
    4 PS417_05980 chemotaxis protein CheA 0.44 0.18
    5 PS417_20680 multidrug DMT transporter permease no 0.18
    6 PS417_12265 ACP phosphodiesterase no 0.18
    7 PS417_14495 maltooligosyl trehalose synthase no 0.17
    8 PS417_08940 thioesterase no 0.17
    9 PS417_03075 hypothetical protein no 0.17
    10 PS417_23435 serine/threonine protein kinase 0.18 0.17
    11 PS417_00315 MFS transporter no 0.16
    12 PS417_04500 hypothetical protein no 0.16
    13 PS417_08525 phospho-2-dehydro-3-deoxyheptonate aldolase no 0.16
    14 PS417_09220 cupin no 0.16
    15 PS417_05300 glucose dehydrogenase no 0.16
    16 PS417_11445 enoyl-CoA hydratase no 0.15
    17 PS417_10400 membrane protein no 0.15
    18 PS417_27900 ABC transporter ATP-binding protein 0.23 0.15
    19 PS417_18420 deoxyribonuclease 0.21 0.15
    20 PS417_16980 exonuclease III 0.24 0.15

    Or look for negative cofitness