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  • Top cofit genes for GFF4620 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Probable DNA recombinase
    SEED: Probable DNA recombinase
    KEGG: type 1 fimbriae regulatory protein FimB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1613 lytic enzyme no 0.48
    2 GFF4619 hypothetical protein no 0.48
    3 GFF3543 Electron transfer flavoprotein, alpha subunit no 0.47
    4 GFF1965 Phosphoglycerate transporter protein PgtP 0.40 0.47
    5 GFF4790 FIG01047833: hypothetical protein no 0.45
    6 GFF4042 SAM-dependent methyltransferase YafE (UbiE paralog) no 0.45
    7 GFF4472 Uncharacterized protein ybdG no 0.45
    8 GFF220 Citrate lyase beta chain (EC 4.1.3.6) no 0.42
    9 GFF1233 Transposase no 0.42
    10 GFF1898 FIG00361523: hypothetical protein no 0.42
    11 GFF4530 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) no 0.42
    12 GFF3603 Secretion system apparatus protein SsaM no 0.42
    13 GFF4749 Type III secretion host injection protein (YopB) no 0.42
    14 GFF3703 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) no 0.41
    15 GFF2669 Putative outer membrane lipoprotein no 0.41
    16 GFF4311 hypothetical protein no 0.40
    17 GFF775 putative excisionase no 0.40
    18 GFF3355 Flagellar basal-body rod protein FlgC no 0.40
    19 GFF4417 Methionine ABC transporter ATP-binding protein no 0.40
    20 GFF4018 Flagellar M-ring protein FliF no 0.39

    Or look for negative cofitness