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  • Top cofit genes for GFF462 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2649 putative autotransporter protein no 0.64
    2 GFF7056 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.59
    3 GFF4397 hypothetical protein no 0.57
    4 GFF4897 Probable ALANIN-rich signal peptide protein no 0.57
    5 GFF5661 hypothetical protein no 0.55
    6 GFF6106 Dienelactone hydrolase family protein no 0.55
    7 GFF2201 hypothetical protein no 0.55
    8 GFF1903 Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching no 0.55
    9 GFF2560 FIG00932643: hypothetical protein no 0.54
    10 GFF338 Chloramphenicol acetyltransferase (EC 2.3.1.28) no 0.54
    11 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.52
    12 GFF7295 HPr kinase/phosphorylase no 0.52
    13 GFF4089 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) no 0.52
    14 GFF7375 Arginine:pyruvate transaminase no 0.51
    15 GFF1055 Fumarylacetoacetate hydrolase family protein 0.29 0.51
    16 GFF4252 hypothetical protein no 0.51
    17 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) no 0.51
    18 GFF7373 CaiB/BaiF family protein no 0.51
    19 GFF1116 Membrane-bound lytic murein transglycosylase D no 0.51
    20 GFF5663 ABC transporter, fused permease protein no 0.51

    Or look for negative cofitness