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Cofit
Protein
Homologs
Top cofit genes for GFF462 from
Variovorax sp. SCN45
BUG/TctC family periplasmic protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2649
putative autotransporter protein
no
0.64
2
GFF7056
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.59
3
GFF4397
hypothetical protein
no
0.57
4
GFF4897
Probable ALANIN-rich signal peptide protein
no
0.57
5
GFF5661
hypothetical protein
no
0.55
6
GFF6106
Dienelactone hydrolase family protein
no
0.55
7
GFF2201
hypothetical protein
no
0.55
8
GFF1903
Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching
no
0.55
9
GFF2560
FIG00932643: hypothetical protein
no
0.54
10
GFF338
Chloramphenicol acetyltransferase (EC 2.3.1.28)
no
0.54
11
GFF7371
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)
no
0.52
12
GFF7295
HPr kinase/phosphorylase
no
0.52
13
GFF4089
Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4)
no
0.52
14
GFF7375
Arginine:pyruvate transaminase
no
0.51
15
GFF1055
Fumarylacetoacetate hydrolase family protein
0.29
0.51
16
GFF4252
hypothetical protein
no
0.51
17
GFF5307
Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241)
no
0.51
18
GFF7373
CaiB/BaiF family protein
no
0.51
19
GFF1116
Membrane-bound lytic murein transglycosylase D
no
0.51
20
GFF5663
ABC transporter, fused permease protein
no
0.51
Or look for
negative cofitness