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  • Top cofit genes for PS417_23600 from Pseudomonas simiae WCS417

    RpiR family transcriptional regulator
    SEED: Transcriptional regulator, RpiR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05985 chemotaxis protein CheY 0.43 0.24
    2 PS417_24480 palmitoyl-CoA hydrolase 0.10 0.24
    3 PS417_03930 thymidine phosphorylase no 0.23
    4 PS417_15545 glucosidase no 0.22
    5 PS417_20585 chemotaxis protein no 0.22
    6 PS417_23580 peptidylprolyl isomerase no 0.22
    7 PS417_19635 lipid kinase no 0.22
    8 PS417_12560 MFS transporter 0.19 0.21
    9 PS417_24705 D-alanyl-D-alanine carboxypeptidase 0.65 0.21
    10 PS417_27465 cystathionine gamma-synthase no 0.20
    11 PS417_02210 diguanylate cyclase no 0.19
    12 PS417_19595 3-methylcrotonyl-CoA carboxylase no 0.19
    13 PS417_28135 sodium:alanine symporter no 0.19
    14 PS417_10330 histidine kinase no 0.19
    15 PS417_18870 hypothetical protein no 0.19
    16 PS417_19625 histidine kinase no 0.19
    17 PS417_17135 LysR family transcriptional regulator no 0.19
    18 PS417_22020 pili assembly chaperone no 0.19
    19 PS417_27955 EvpB family type VI secretion protein no 0.18
    20 PS417_19105 hypothetical protein no 0.18

    Or look for negative cofitness