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  • Top cofit genes for PS417_02350 from Pseudomonas simiae WCS417

    channel protein TolC
    SEED: Type I secretion outer membrane protein, TolC precursor
    KEGG: outer membrane channel protein TolC

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11485 AraC family transcriptional regulator no 0.18
    2 PS417_06245 zinc metallopeptidase RseP 0.48 0.17
    3 PS417_03950 hypothetical protein no 0.17
    4 PS417_04800 alginate O-acetyltransferase 0.26 0.16
    5 PS417_27315 hypothetical protein 0.53 0.16
    6 PS417_18375 hypothetical protein no 0.16
    7 PS417_26405 diguanylate cyclase 0.40 0.16
    8 PS417_12870 enoyl-CoA hydratase no 0.15
    9 PS417_18425 sporulation protein no 0.15
    10 PS417_14475 2-hydroxyacid dehydrogenase no 0.15
    11 PS417_07870 hypothetical protein no 0.15
    12 PS417_23760 DeoR faimly transcriptional regulator 0.31 0.14
    13 PS417_06445 iron-siderophore ABC transporter permease 0.42 0.14
    14 PS417_19975 hypothetical protein no 0.14
    15 PS417_10010 Replication protein P no 0.14
    16 PS417_20600 hypothetical protein no 0.14
    17 PS417_25085 hypothetical protein no 0.14
    18 PS417_27520 uroporphyrin-III methyltransferase 0.81 0.14
    19 PS417_25310 hypothetical protein no 0.14
    20 PS417_22355 glycine cleavage system protein H 0.65 0.14

    Or look for negative cofitness